CDS

Accession Number TCMCG007C23948
gbkey CDS
Protein Id XP_009137798.1
Location complement(join(28349109..28349726,28349799..28350843,28350924..28351788,28352014..28352413,28352496..28352966,28353036..28353122))
Gene LOC103861842
GeneID 103861842
Organism Brassica rapa

Protein

Length 1161aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA249065
db_source XM_009139550.3
Definition protein CHROMATIN REMODELING 8 isoform X1 [Brassica rapa]

EGGNOG-MAPPER Annotation

COG_category K
Description chromatin remodeling 8
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko03036        [VIEW IN KEGG]
ko03400        [VIEW IN KEGG]
KEGG_ko ko:K10841        [VIEW IN KEGG]
EC -
KEGG_Pathway ko03420        [VIEW IN KEGG]
map03420        [VIEW IN KEGG]
GOs GO:0001207        [VIEW IN EMBL-EBI]
GO:0001208        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006259        [VIEW IN EMBL-EBI]
GO:0006281        [VIEW IN EMBL-EBI]
GO:0006283        [VIEW IN EMBL-EBI]
GO:0006289        [VIEW IN EMBL-EBI]
GO:0006325        [VIEW IN EMBL-EBI]
GO:0006355        [VIEW IN EMBL-EBI]
GO:0006357        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0006974        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0008094        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009314        [VIEW IN EMBL-EBI]
GO:0009411        [VIEW IN EMBL-EBI]
GO:0009416        [VIEW IN EMBL-EBI]
GO:0009628        [VIEW IN EMBL-EBI]
GO:0009889        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010212        [VIEW IN EMBL-EBI]
GO:0010332        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010556        [VIEW IN EMBL-EBI]
GO:0010767        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016462        [VIEW IN EMBL-EBI]
GO:0016787        [VIEW IN EMBL-EBI]
GO:0016817        [VIEW IN EMBL-EBI]
GO:0016818        [VIEW IN EMBL-EBI]
GO:0016887        [VIEW IN EMBL-EBI]
GO:0017111        [VIEW IN EMBL-EBI]
GO:0019219        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031326        [VIEW IN EMBL-EBI]
GO:0033554        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034644        [VIEW IN EMBL-EBI]
GO:0034728        [VIEW IN EMBL-EBI]
GO:0042623        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043618        [VIEW IN EMBL-EBI]
GO:0043620        [VIEW IN EMBL-EBI]
GO:0043933        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051252        [VIEW IN EMBL-EBI]
GO:0051276        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0071214        [VIEW IN EMBL-EBI]
GO:0071478        [VIEW IN EMBL-EBI]
GO:0071482        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071824        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0104004        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1903506        [VIEW IN EMBL-EBI]
GO:2000112        [VIEW IN EMBL-EBI]
GO:2001141        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGAGGAAGACGAGGATATGTTTTTGAGTAGCTTAGGGGTGACATCTGCTAATCCTGCAGATATCGAACAGACGATACTCGATGAGGCTACAAAGAAGCTTGATAACGATGAGAGTGTGGAGGAGCGGTTGGAAGGAAGCAATCTACTTCCATCAAGCCAGAGCGAGATTTTGAATAAACTGAGAGCTGTGAAGTTTGAGATAGACGCTGTTGCATCTACTGTTGAGCAAGCGGAGGAGGAGGATGGGTTGCAGAGTGGTTCTGTACTTCAGAATGCTCTTGCTAAAGACCGTCTTAGAAGCCTTAGGAAGAGGAAAAATGAGCTTGAAAAGGAACTCTCTGGTTTACATGGTCAGGGGGGCACTTCTGGTGGTGCTGATCGTGGTGATATACTGCGAGATTTGGTGAAGGGAGAGCCTAGTAGTCGTAAGAGGAAGTTGAAAGAGGTTCGGAAACCAAGCAAGAGAGAAGGGAAGAAGGTGAAAGTGGTGTCGTTTCATGAGGATACGGATTTTGACGCCGTTTTCGATGCTGCTTCTGCTGGTTTTGTTGAAACGGAAAGAGATGAATTGGTTAGAAAAGGAATTTTAACTCCTTTTCACAAGCTCGAGGGTTTTGAACGCCGACTTCAACAACCTGGACCGTCTAACACGCGTAACCTACCTGAAGGAGAAGATGATAATGAGGACTCCAGCAGTATTGATAGAGCTGTTCAGTCAATGTCGCTGGCTGCAAAAGCTCGCCCAACGACCAAGCTACTTGATGCACAGGACTTGCCAAAGCTTGAAGCGACGCCTGTTCCTTTTAGAAGGCTAAGAAAGCTTTACAAGACTAATGATTCTTCGGATAGTGATGCAAAGAAAAGTAAAGGTGGGAAGAGCAAAAAGAAGCGGCCTTTGCCTAAGAGGAAATGGACAAAGCGGATTTCTAACGAAGACTCTAGTCTTCAAGAAAATGAAGATGGACGGAGAATCTCGGCCACGTCCAGTTGTGAGGAAGAAGAGCTAGATGATTTTGATGAGGTAGACGACAGCGAGAAATCTTCTGTACCGCTTGAAGGTGGATTAAACATTCCTGAAGGCATATTTATTAAACTTTTTGATTACCAAAGAGTTGGAGTGCAGTGGCTCTGGGAACTTCATTGCCAAAAGGCTGGTGGCATTATCGGGGACGAGATGGGTCTTGGTAAGACTGTACAGGTCTTATCTTTTCTCGGATCCTTGCATTTCAGCAAGATGTACAAACCGAGTATTGTCATATGTCCTGTCACACTCTTGCGTCAGTGGAGAAGAGAAGCACGGACATGGTACCCGGATTTTCACGTGGAAATACTCCATGACTCGGCAAAAGATTCAAATGGCAAAGGACGAGTCGATGCCTCTGAAAGCGATTATGATAGTGAAGTTTCAGTCGACGGTGATCATGAGCAAAAGTCTAAGCACACCAAGAAATGGAGTTCTTTGATAAACCGGGTTCTAAACTCTGATTCGGGGCTACTCATCACTACATATGAACAATTGAGGCTGCATGGTGAGAAGCTGCTCAATATTGAGTGGGGCTATGCAGTACTTGACGAAGGCCATCGGATCCGGAACCCAAATGCTGAAATTACTTTGGTGTGCAAACAGTTGCAGACCGTCCATCGAATTATTATGACTGGGGCACCGATCCAGAATAAACTGACAGAACTCTGGTCCTTGTTCGATTTTGTTTTCCCGGGAAAACTGGGAGTCCTACCCGTGTTTGAGGCTGAGTTCTCTGTTCCCATAACTGTGGGTGGCTACGCCAATGCGTCTCCCTTGCAAGTGTCAACAGCCTACAGATGTGCGGTTGTTCTTCGTGATCTGATCATGCCATACCTCCTCCGCCGAATGAAGGCTGATGTGAACGCACACCTCACAAAAAAGACTGAACATGTTCTCTTCTGCAGCCTCACCGTGGAGCAGCGTTCTACCTACAGGGCGTTCCTTGCTAGCTCAGAGGTAGAAGATATTTTTGACGGCAACAAGAACTCTCTGTATGGGATCGATGTGATGCGTAAGATATGCAACCACCCTGATCTACTTGAGAGAGAACACTCTCACCAGAACCCAGATTATGGGAATCCAGAACGCAGCGGGAAGATGAAGGTTGTTGCGGAAGTTCTCAAGGTCTGGAAACAGCAAGGACACCGTGTACTTCTGTTCTCGCAGACTCAGCAGATGCTTGACATCCTCGAGAGCTTCTTGGTTGCAAACGAGTATAGTTACCGGAGGATGGATGGTCTTACGCCAGTGAAACAGAGGATGGCGTTGATTGATGAGTTTAACAACTCAGATGATGTGTTTGTTTTCGTTCTGACGACCAAGGTGGGTGGTTTGGGAACAAACTTGACTGGGGCGAATAGAGTCATCATCTTTGACCCGGATTGGAATCCCTCAAATGATATGCAGGCAAGGGAACGAGCTTGGCGTATAGGGCAGAAGAAGGATGTTACTGTTTACAGATTGATCACACGGGGGACAATTGAGGAGAAAGTATATCATAGACAGATATATAAACATTTTCTCACCAATAGGATTTTGAAGAATCCACAACAGAGAAGATTCTTCAAAGCTAGGGATATGAAAGATCTTTTCATCCTGAATGATGATGGTGATAGCAACGCCTCCACCGAGACCTCTAACATATTCAGTCAGCTAGCTGAAGATATAAACATCATAGGAGCTCAAACAGAGAATACAAGTACAACCGACTCCACTACACAACTTGATACTCACGATGCAGCAGAAGAACTCTCAGGAGAGAAAGATGCGGAAACCAATGGCGAGCCAGTGGATGAAGAGACAAATATCTTGAAGAGTCTCTTCGACGCACATGGAATACATAGTGCTGTGAATCACGACGCCATCATCAACGCAAACGACGAGGAAGAGAAGATGAGACTTGAACACCAGGCATCTCAAGTGGCGCAGAGAGCTGCGGAAGCATTGCGCCAATCGCGGATGCTGCGTAGCCGCGAAAGCATCTCAGTACCCACATGGACGGGAAGATCTGGCTGTGCAGGTGCACCTTCATCTGTACGGAGGAGATTCGGATCAACTGTGAACTCCCGGTTAACCACAGCAGACAAATCATCAGCTGTCAAGAACGGTATCAGCGCGGGTCTATCTTCAGGCAAAGCACCCTCTTCCGCAGAGCTTCTCAACAAAATCCGCGGAAGCAGAGAACAAGCCATTGGCGTTGGCCTTGAGCAGACACAGACTTCTTCGAGTTCAAGCAGCAGAGTAGGTTCGTTACAGCCAGAGGTATTGATCCGACAGATATGCAGCTTTGTACAGCGAAAAGGCGGAAGCACGGACACGAGCAGCATTGTCAACCATTTCTCGGACAGAGTTCCTGCTAAGGACGTACCGTTGTTTAAGAGTCTTTTGAAGGAGATTGCCACGCTTCGTAAGGATCCCAACGGTTCGGTGTGGGTCCTCAAATCAGAATACAAAGACTAG
Protein:  
MEEDEDMFLSSLGVTSANPADIEQTILDEATKKLDNDESVEERLEGSNLLPSSQSEILNKLRAVKFEIDAVASTVEQAEEEDGLQSGSVLQNALAKDRLRSLRKRKNELEKELSGLHGQGGTSGGADRGDILRDLVKGEPSSRKRKLKEVRKPSKREGKKVKVVSFHEDTDFDAVFDAASAGFVETERDELVRKGILTPFHKLEGFERRLQQPGPSNTRNLPEGEDDNEDSSSIDRAVQSMSLAAKARPTTKLLDAQDLPKLEATPVPFRRLRKLYKTNDSSDSDAKKSKGGKSKKKRPLPKRKWTKRISNEDSSLQENEDGRRISATSSCEEEELDDFDEVDDSEKSSVPLEGGLNIPEGIFIKLFDYQRVGVQWLWELHCQKAGGIIGDEMGLGKTVQVLSFLGSLHFSKMYKPSIVICPVTLLRQWRREARTWYPDFHVEILHDSAKDSNGKGRVDASESDYDSEVSVDGDHEQKSKHTKKWSSLINRVLNSDSGLLITTYEQLRLHGEKLLNIEWGYAVLDEGHRIRNPNAEITLVCKQLQTVHRIIMTGAPIQNKLTELWSLFDFVFPGKLGVLPVFEAEFSVPITVGGYANASPLQVSTAYRCAVVLRDLIMPYLLRRMKADVNAHLTKKTEHVLFCSLTVEQRSTYRAFLASSEVEDIFDGNKNSLYGIDVMRKICNHPDLLEREHSHQNPDYGNPERSGKMKVVAEVLKVWKQQGHRVLLFSQTQQMLDILESFLVANEYSYRRMDGLTPVKQRMALIDEFNNSDDVFVFVLTTKVGGLGTNLTGANRVIIFDPDWNPSNDMQARERAWRIGQKKDVTVYRLITRGTIEEKVYHRQIYKHFLTNRILKNPQQRRFFKARDMKDLFILNDDGDSNASTETSNIFSQLAEDINIIGAQTENTSTTDSTTQLDTHDAAEELSGEKDAETNGEPVDEETNILKSLFDAHGIHSAVNHDAIINANDEEEKMRLEHQASQVAQRAAEALRQSRMLRSRESISVPTWTGRSGCAGAPSSVRRRFGSTVNSRLTTADKSSAVKNGISAGLSSGKAPSSAELLNKIRGSREQAIGVGLEQTQTSSSSSSRVGSLQPEVLIRQICSFVQRKGGSTDTSSIVNHFSDRVPAKDVPLFKSLLKEIATLRKDPNGSVWVLKSEYKD